YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67938793, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWYLDVLKK YAVFSGRARR KEYWYFYLFN TIIEVALMLV DYMVGWYSIE GGIGVLSAIY  60
   61 VLGIMIPGIA VSIRRLHDTG RSGWWLLIGL IPFIGAIVLL VFMVQDSKPG ENEYGPNPKE 120
  121 VIV

Type	Start	End	Confidence
Cytoplasmic	1	22	0.99
Transmembrane Helix	23	45	0.90
Non-Cytoplasmic	46	51	0.82
Transmembrane Helix	52	73	0.92
Cytoplasmic	74	82	0.89
Transmembrane Helix	83	104	0.95
Non-Cytoplasmic	105	123	0.98