YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67938694, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFLSSKRFI SIVLAILVVL NLVLLGTLLW QNTHSSQKQG RDTVNHKYRN KQSFFQKELQ  60
   61 LTEEQSEQFN ELRRQHFQGT LPALVAISGL KRQLIQEALK VEPDTLSMKT LAGKIGRQQA 120
  121 IVEYRLAWHF NSLSRVCTPE QRDSLQRVLE KVTAKPFKLK RRLLLRRIEF SPLQQDSSEK 180
  181 RGMRTKEPAQ QSTQQQ

Type	Start	End	Confidence
Cytoplasmic	1	8	0.62
Transmembrane Helix	9	30	0.63
Non-Cytoplasmic	31	196	0.96