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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75761290, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLMPVTLLP ITRKKASGPD SELIHKLLNS PNDVKTKFIN DLVSQVKKNQ FSGINIDFEA  60
   61 VPESDRENLT NFMKELTTEF HEHDLLVTQD VPANDKAFDY SALAKIIDRM IVMMYDEHYG 120
  121 AGEPGPIASN KWFQHTLKEL NIPSNKLIVA FGNYGYDWEV NSKEAAKSLT FSEVMAMAHD 180
  181 SNMKIQWDNM SGNPYFRYKT GEKEHTAWFL DGVTLYNQVK IAMDNNAKGV ALWRLGAEDP 240
  241 TIWKVLKNPI EAQKNPNVLH KINSLDEVNY SGQGEILQIE NERKNGLRDF KVGKDGYLTD 300
  301 EVYQSLPSAY EVQRYGKPKG KQVVLTFDDG PDPKYTPEIL NILKENKIKA AFFVLGENAQ 360
  361 LNPSIVKRIY DEGHEIGNHT FKHPNVADTS LLRTKVELNT TQRLIQEITG HSTVLFRPPY 420
  421 EADANPDSSN EIVPILRAQN MNYTMVAEKV DPEDWATPST NELVKRALNP VYKGEGNIIL 480
  481 LHDAGGNRTH TVEALPIIIK DLRKHGYSFV TISDLMNKER EEIMPPVSSE GKQYLLYNKA 540
  541 VFSGAGYFKH ILTTIFYVAI GLGIFRFLFL IYFAWKQKRK TLSRYINSSY QPFVSVVIAA 600
  601 YNEEKVIAKT IRSILDSNYR EFEVIVVDDG STDDTSKVMK ETFYKHSKVR FIQKENGGKS 660
  661 SAMNLAFQQS RGEIIVTLDA DTIIAQDAIS LMIRHFEDQN VAAVSGNVKV GNRRNLLTTW 720
  721 QHVEYITGFN LERRAFDELN CITVVPGAIG AWRKKNVVES GYLSEDTLAE DTDLTITFLR 780
  781 QGHRIVYEEK AYAFTESPED VKSLIKQRYR WSYGTLQCLW KHRKALCNSK HKTLGFIALP 840
  841 NMWLFQYVLQ FIAPLXDILM IMGLFGSDPL KVLGFYFVFF LLDLLASLFA FKLEEENPKP 900
  901 LVWLILQRFI YRQFMTYVVI KSICSSLRGV AVGWNKLKRM GSVKHSTEHK EAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle