YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75761131, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSACSYKEEG KKMAKKQSIL SPIIRITFTF LVLCGLVYPL IVTGIAQAVM KDNADGSLIY  60
   61 NDKNEVIGSK LIGQNFTDPR YFQGRVSSIE YKAEASGSNN YAPSNPDLEK RVEKSIEEWK 120
  121 KQNRAVPVTE VPIDLVTNSG SGLDPDISPQ AASVQVDRIS KLTNIPKETL NQLIKDQTEG 180
  181 AALGLFGENR VNVLKLNLEL QKLLK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.82
Transmembrane Helix	21	42	0.81
Non-Cytoplasmic	43	205	0.94