YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75761017, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MXHRKRSKRV VIATLDCNPL VSGNGKRRLE EARIEVTTGV LEAEAVLLNR YFFHYMKTKR  60
   61 PFVTIKTAMS LDGKIATVTG ESKWITGEEA RADVHQYRHT HDAILVGVNT VIADNPHLTT 120
  121 RIPNGGKHPI RVVLDTHLRT PPSSHVITDG LAPTWIIVGK DVKKEKISSY NSKNIAIFQM 180
  181 ETKHIEIEDL LSFLGEKQIL SLFVEGGQSI HASFLKTNNF NEIVTYISPK LIGGKDAPTL 240
  241 FGGNGFSKLQ DALSLKIQEM KQIGDDIKIV ANARNEVTEC LQEL

Type	Start	End	Confidence
Signal Peptide	1	23	0.64
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	284	0.99