YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74491555, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKRSPLLL LILTFIFVIT GLGFTYFKQN KTTPSKHNVT KENWLNDPYL RWSYTHMKEF  60
   61 TLVNNVKNNP DQIAHFPSAL QNLDDFAVER RFGNTTPLKK LLDDNKTDAF VVVHNGQLVY 120
  121 ERYFNEYKQN EPHGMASLAK VFTGAIIQSL AEEKRIDLEK TADTYIKELK NTPFGNATLQ 180
  181 QLMDMQVSAE YPTHGYEQPG LENQDAQLYL ASNILPRGKN YDGPMKIYDM LREAEETAPP 240
  241 GSSFSYNNGS TETLAWIIRT ITGKSLAENV SERIWSQIGM EENAYYVTDE MKIEQASAGL 300
  301 NATARDMARF GQLLLNNGEY NGKQILPSSI TESVKNVQEG ELEISIGASI SYHNQWWIPH 360
  361 NEQGAFEVLG SYGQTLYIDP KANMVIVHFS SNATPSNEIH SVYSNMYIDI AHHLEKLPQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.88
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	419	0.99