YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228818498, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVYMKQLKG IIISIIAILS ILVAVYEVLV PEETSVKKTN TYDQVLEFPK ERYPETGKHI  60
   61 TDAIKEGHSE VCTIDRGGAA DRRKLSLAPY PSKKGYDRDE WPMAMCKEGG KGAHIEYISP 120
  121 ADNRGAGSWV GNKLDKYPDG TRVKFEVK

Type	Start	End	Confidence
Cytoplasmic	1	9	0.78
Transmembrane Helix	10	30	0.90
Non-Cytoplasmic	31	148	0.90