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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|218540951, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKPFKVLS SIALTAVLGL SFGAGTQSAY AETPVNKTAT SPVDDHLIPE ERLADALKKR  60
   61 GVIDSSASEK ETKKAVEKYV EDKKGENPGK EATNGDQLTK EASDFLKKVK DAKADTKEKL 120
  121 NQPATGTPAA TGPVKGGLNG KVPTSPAKQK AYNGDVRKDK VLVLLVEYAD FKHNNIDKEP 180
  181 GYMYSEDFNK EHYEKMLFGD EPFALEDGSK IETFKQYYEE QSGGSYTVDG TVTKWLTVPG 240
  241 KAADYGADAA TGHDNKGPKG PRDLVKDALK AAVDSGLDLS QFDQFDQYDV NGDGNQNQPD 300
  301 GLIDHLMIIH AGVGQEAGGG KLGDDAIWSH RWTVGPKPFA IEGTQAKVPY WGGKMAAFDY 360
  361 TIEPEDGAVG VFAHEYGHDL GLPDEYDTDY TGHGEPIQAW SVMSGGSWAG KIAGTTPTSF 420
  421 SPQNKEFFQK TIGGNWANIV EVDYEKLNKG IGLATYLDQS VTKSNRPGMI RVNLPDKDVK 480
  481 TIAPAFGKQY YYSTKGDNLH TTLETPLFDL TNATNAKFDF KSLYEIEAEY DFLEVHAVTE 540
  541 DGQKTLIERL GEKANSGNAD STNGKWIDKS YDLSQFKGKK VKLTFEYITD GGLALNGFLL 600
  601 DNASLTVDGK VTFSDDAEGT PQLKLDGFVV SSGTEKKKHN YYVEWRNHTG SDSALKFARG 660
  661 PEYNSGMVVW YADSAYADNW VGLHPGHGFL GVVDSHPEAI VGTLNGKPTI DSSTRFQIAD 720
  721 AAFSFDKTPA WKVVSPTRGT YTYDGLAGVA KFDDSKTYIN QQIPDAGRIL PKLGLKFEVV 780
  781 GQADDNSAGA VRLYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle