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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86139341, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRILALILA LFLTEPASAA RYAFILGNSD YAELGDLANT HADAEAYAKA LEGLGFAITL  60
   61 NKDLDRRQTL HAFYSFLNQV APGDDVAFVY SGHGWSNGRV NYIVPTEVQR PQPEFQKLLE 120
  121 DATIPLQNGH NGLLDELEAK GVALTIAVID ACRDSPFLQS PGTKSIGVTR GLTPILPSTG 180
  181 TFIVYSAGKG QQALDHLPTD SPDQKLSVFT RNFVQHLKPG TYLQDAILDA RRQTTRQAAS 240
  241 YGGHQQLPAY YDQTTARICL AGQCGVQTQE PPKPPTDSAA QTVALDQCSA LFKVAQDTDQ 300
  301 CYAYLAYQSH CADHTFAPIA ESYVRLRCEA TEPPPITTPQ TRAQIEPENQ TIASSQTEPT 360
  361 PVAPRLTEQA ATIPDPDQFL ALLSKNKGNV PAPPLAGNRP AAPSTAAAGA PSPTAAVATP 420
  421 SSPTPQQAAL VSCADEAGHP RHPHLTGQRI NSAGVKWDSL RAETAILACK RAVQLNPETP 480
  481 AVQAFLARAY DKANNLPQAL SNYRAAAAAQ DPMAQTNLAL MYRKGQGVTQ SDQLAVTYLR 540
  541 RAANQGYPIA ETQLGWMYEK GRAVPQDDAL AVSWYRKAAN RDHPRAQYNL AWMYENGRGT 600
  601 SQSYSRAYDW YQKAAQADYL NAQYKIGVFH REGYGVSQND VEAVRWFRMA AARDLPKAQT 660
  661 SLGWMYEKGR GVQQSYSKAL EWYHKAAAQG NATATVNIGV QYELGRGVTQ NDQRAVSYYI 720
  721 DGLKLGSETP LGWSGDSWRQ STLMAMQRRL RDMGLYTGAI DGKIGPGTRA AMRALLGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle