YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67774058, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFLASKRFV TTSLVILVLL NLTLLGILWM QNFSGKQAPV QVKITRQYNR QIYFTAPLAL  60
   61 SEKQAISFQE LRREHFRRVR PEMQAISLLK EQLVKEAIRD NPDSLKIVKL AESIGKHQTS 120
  121 VERQLAEHFH ELSEVCTPSQ RDSLQKILTH MGKRQMHIRK DTIENLTR

Type	Start	End	Confidence
Cytoplasmic	1	8	0.71
Transmembrane Helix	9	30	0.74
Non-Cytoplasmic	31	168	0.93