YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119354616, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNNRKTGIS VSAALAAVLL GIALFLFYQS GTGSFPFTSK ATSIQKETHM TQRPLTPEEE  60
   61 RVIVHKGTER PFTGAYYKNT EDGVYHCRRC DAPLFSSKDK FDSGTGWPSF DDAIAGAVKE 120
  121 VPDTDGRRTE IVCARCGAHL GHVFFNEGMT AKSVRHCVNS ISLLFHPDAE AAPVTQKAVF 180
  181 AGGCFWGVEY HFSKTKGVLS VTSGYTGGSI ENPSYKQVCS GRTGHAEAVE IAFDPRVVSY 240
  241 EALAKLFFEI HDPTQLNRQG PDMGTQYRSA VFYSDEEQKK TAEKLIGELK EKGYNVVTTI 300
  301 EPAGTFWNAE EYHQDYYRKT GHQPYCHIYQ KRF

Type	Start	End	Confidence
Signal Peptide	1	33	0.68
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	333	0.99