YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74492437, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERRLFMKYK WLYIGLIFSI MMALVPVSTL AYTNTPHNWG IPRPKNETVP DAGKLYTDLL  60
   61 QKNGGFYLGD TKKKDIYLTF DNGYENGYTE KILDVLKEKK VPATFFVTGH YIKTQKDLLL 120
  121 RMKDEGHIIG NHSWSHPDFT AVNDEKLREE LTSVTEEIKK VTGQKEVKYV RPPRGVFSER 180
  181 TLALTKEMGY YNVFWSLAFL DWKVDQQRGW QYAHNNVMTM IHPGSILLLH AISKDNAEAL 240
  241 AKIIDDLREK GYHFKSLDDL VKSNQP

Type	Start	End	Confidence
Cytoplasmic	1	10	0.81
Transmembrane Helix	11	32	0.82
Non-Cytoplasmic	33	266	0.99