YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228969472, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKTKALSS VLLGFTLALT GCAGTKAEEN HSKQKQEQVA KETKKENKLT KGQKMANILS  60
   61 KTNWQGTRVY DKDKNDLTKE NANFIGLAKY DAKSGRYEFF DAKTGASRGD KGTFFVTNDG 120
  121 KKRILISESM KYQAVVDMTK LNKNVFTYKR MGKDANGKDV EVFVEHVPYK EKELSFTDPD 180
  181 KQLNTTTGDI VKNVDGDKIL GGTLWHGTKI LDEAGNDVTQ FNSNFISLAK FDDKSNKYEF 240
  241 FNSETGQSRG DYGYFDVVHE NKIRAHVSIG NNKYGAALEL TELNKNKFTY KRTGKDQAGK 300
  301 DITIFVEHEP YKGDMKPQFS F

Type	Start	End	Confidence
Signal Peptide	1	27	0.93
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	321	0.99