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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75759756, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEGVCMSKK QKQNKKKTHV PFRLNVLFFC VFLMFSAVIV RLGYVQIVRG EEYKNEVEKK  60
   61 ENSTISNPVP RGKIFDRYGR PVVDNAAIRT ITFTKMKGST AEDRLETAKK LADLIEVPTD 120
  121 KLTDRDKKDY WLAMHKEEAK EKITNKDRQE FKDKKIDDKE LDERQRSRVT EEEINQLSAK 180
  181 DLEILAIKSK MDGGYAMTPQ VIKKDATEKE YSIISENLAA LPGVDTNVDW DRKYTYDDLF 240
  241 RSVLGGVSTS DEGLPRERLD YYLVRDYNRN DRVGKSYLEQ QYEDSLHGTK AEVRNVTDKN 300
  301 GNILETINVS KGQSGNDLNL TIDMELQKRV EDILAKNLMR FKGSEPLLDR AFVVMMNPKN 360
  361 GEVLSMAGKQ LVNEDGQTKV NDFALGTMTS SYPMGSTVKG ATVLTGYQTG AIQPGSVQLD 420
  421 EPIKLKGTPT KSSWKTMGYI NDLTALKMSS NVYMFKTAMN IAGVQYVRGG TLDIPQKAFD 480
  481 TMRYYFGQFG LGVKTGIDLP NESAGQMGRS SQPGFLLDLS IGQYDTYTPL QLAQYISTIA 540
  541 NGGYRMQPQV VKEIRQPAVK PDEVGKVVQS MEPKVLNRVD MPESQIKRVQ EGFRQVYNDS 600
  601 GGTATKYFTG AKYKAAGKTG TAQTVYGGDK EIGRKANGER VETYNLTLVG YAPLEDPEVA 660
  661 FSVVVPWVHD DKTGINGYIG REIMDAYFDL KNKEVNGETP KDDKDNKNKD QDDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle