YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228963469, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRKIVVAL GGNAIQSGEA TAGAQQEALE KTAEQLVKIM ENDVDIVIAH GNGPQVGNIL  60
   61 LQQKAAETEK TPAMPLDTCG AMSQGMIGYW MENAIEKALK KRNIKKDVAT VITRVVVDKK 120
  121 DEAFKNPTKP IGPFYTEEEA RRLMDETKAV FKEDAGRGWR RVVPSPKPVS IHEHKVINSL 180
  181 VEDGNIVIAV GGGGIPVIDS EEGLKGTEAV IDKDFAAQKL AELVDADTLV ILTAVDHVYV 240
  241 NYNQPNQKKL EHVTVNQLEE YIEEQQFAAG SMLPKIEAAI NFVNTNPKRK TIITSLEKVY 300
  301 EALEEKAGTI ISKQNVCMYV

Type	Start	End	Confidence
Signal Peptide	1	22	0.91
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	320	0.99