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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86139142, gi|...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.20
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNARNIAFW VVLFVLILAL FNLFSGSGGT MQSNERAFSD FVTSVEGGQV STVVLDGERV  60
   61 EYTTSDGSKF VTIRPSDAEV TALLIENNIP VRAEKQQQST FQSFLITLLP FVLLIGVWIY 120
  121 FMNRMQGGGK GGAMGFGKSK AKMLTEKHGR VTFDDVAGID EAKEELEEIV EFLRNPQKFS 180
  181 RLGGKIPKGA LLVGPPGTGK TLLARAIAGE AGVPFFTISG SDFVEMFVGV GASRVRDMFE 240
  241 QAKKNAPCIV FIDEIDAVGR HRGAGYGGGN DEREQTLNQL LVEMDGFEAN EGVIILAATN 300
  301 RKDVLDPALL RPGRFDRNVT VGNPDIKGRE KILGVHARKT PLGPDVDLRI IARGTPGFSG 360
  361 ADLANLVNES ALMAARVGRR FVTMEDFESA KDKVMMGAER RSMVLTQDQK EKTAYHEAGH 420
  421 AVVGLKLPEC DPVYKATIIP RGGALGMVVS LPEMDRLNWH KDECNQKLAM TMAGKAAEII 480
  481 KYGEDHVSNG PAGDIQQASQ LARAMIMRWG MSDKIGNIDY AEAHEGYSGN TTGFSVSAHT 540
  541 KELIEEEVRV FIQNGYDRAF EILTEYKDEW ERLAQGLLEY ETLTGDEIKR VMKGEPPHEK 600
  601 GDDSDEDEGN ASVTAIPKAK PKKPATDGET DSGLEPEPSS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle