YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67774686, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKVSRDVFY GLLICMLSVC RCRWRDSSFY VSSFFWEAEG YAEAFCNFKY PASMNVLVTG  60
   61 AAGFIGFHVC RRLLDRGDSV TGLDNMNDYY DVHLKESRLA QLEPEEAFSF VKMDLADRAG 120
  121 MEELFDASRF DRVINLAAQA GVRYSLINPY SYIDSNIQGF LNILEGCRHN GIEHLVYASS 180
  181 SSVYGANESM PFSVHDNVDH PLSLYAASKK ANELMAHTYS HLYGIPSTGL RFFTVYGPWG 240
  241 RPDMALFLFT EAILAGRPIE VFNFGNHRRD FTYIDDIVEG VLRTLDHPAE PNPDWTGLKP 300
  301 DPGTSRAPWR VYNIGNSRPV NLMDYIGALE RELGKTAEKN FLPMQPGDVP DTYADVDQLI 360
  361 EDIGYKPETS VDEGIRRFVA WYREYYGSKE SGSVK

Type	Start	End	Confidence
Signal Peptide	1	22	0.77
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	395	0.96