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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119354670, gi...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLINSDFNT LPELFSSIFT HYKGQSSTFP LARKINGAYE PISYDLLQED VRHCAAYLKE  60
   61 HGIAAKDRVA ILSENRPGWY MADMAILMLG AVTVPLYPSL PPNQIEYILR NCGAKGIIVS 120
  121 NMLQLGKIIS IWQKLPDLSL VIVMNRLEET IDEVVDLNQV KDEGKTILEK KPWLLDGIDV 180
  181 EPDDIATLIY TSGTTGLPKG VMLTHRNLCE NVKSCSTVIR LDETDRSLSF LPLSHAYERT 240
  241 GGYYLLFSCG AAIYLAESVE TVSLNIAEAR PTIIFTVPRL FDRIKANTLK QIGNESAIKQ 300
  301 KIFFWALHTG EEFHRQMNAK GKAALAVSMQ HSLADKLVYA KIRKKFGGKL RYFVSGGAAL 360
  361 PQKVGEFFQA LSINILEGYG LTETSPVTNV NRPEKIKLGT VGPAVNNVQI RIADDGEILM 420
  421 KGPNIMKGYW QDEDATREVI KDGWFYSGDI GEIDRDGYLK ITDRKKHIIV TSGGKNIAPQ 480
  481 PIENLISESP YVDQVIVIGE KRPFLIALIV PDFSKLMEYA KENSISATTN KALIENKNIQ 540
  541 QIYEKLMRTI SRQLATHEKV RKFLLVDEAF SIENGDMTPT MKLKRKTITS RYAAEIDKVY 600
  601 QALNMVYNTE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle