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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74493163, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGDIILKKN YMKALVVATT LAIPFATYST PALAALKVEA NQSVAAASDR TYDTEIKIYK  60
   61 DQKDEPSMVS QYIKDPKVTI AAGKKIVTVT MQDSDYFQYL RIEDRNQPGV FHDVKVLSED 120
  121 KRKNGTKVVQ FEIGEFEKKH NMQMHILIPA IGYDHKYQVQ FEIKDPTVGN KETEKPDDNS 180
  181 NSGNTETDNP VDNQNMITDN KLRELVNKKV FNRKDLNTPI TKEELLQVKD LFLNTNEILD 240
  241 YSALKYMPNL KSLTVANAKI KDPSFFANLK QLNHLALRGN EFSDVTPLVK MNNLESLDLS 300
  301 NNKITNVAPL TEMKNVKTLY LSGNQIEDVT ALAKMEQLDY LNLANNKIKN VAPLSALKNV 360
  361 TYLTLAGNQI EDIRPLYSLP LKDLVLTRNN VKDLSGIDQM NQLNKLFVGK NQIKDVTPLA 420
  421 KMTQLTELDL PNNELKDITP LSSLVNLQKL DLEANYITDL SPVSNLKKLV FLSFVANEIR 480
  481 DVRPVIELSK TAYINVQNQK VFLEETEVNK EVKVPIYEKN GEISTKIRLK SDNGTYSNGV 540
  541 VKWSTPGEKV YEFGVKDPFA DTGIFFTGSV IQNVVESKDG NTSKEDEKTE VVEFKDVPKG 600
  601 HWSEEAINYL AKEKLFIGYG NGEFGFGDNI TRGQVALLIQ RYLKLENNLE PKTAFTDTKG 660
  661 NMYETAIDAV VQAGIMTGYG NDIFRPDGVL TRYEMSVVLQ RVFQLKENEN SAENFKDIPN 720
  721 GHWAKGYVKA LVDNKISKGD GEGNFLGDNF VTREQYAQFL YNAIKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle