YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74493455, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINKKNINHL LFLIWVVALI ATMGSLFFSE ILKYEPCKLC WIQRILMYPI AVTGAIAVIR  60
   61 KDYNYVIYVL PLSILGIFIS SYHYGIQKGI INIESDHFCG RIPCVGQYIN WFDFITIPFL 120
  121 ALTAFVIIFL CALFIYFKKS GEQH

Type	Start	End	Confidence
Cytoplasmic	1	9	0.87
Transmembrane Helix	10	32	0.89
Non-Cytoplasmic	33	39	0.87
Transmembrane Helix	40	59	0.92
Cytoplasmic	60	64	0.89
Transmembrane Helix	65	86	0.91
Non-Cytoplasmic	87	114	0.96
Transmembrane Helix	115	137	0.94
Cytoplasmic	138	144	0.96