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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75758789, gi|...
Protein type: Transmembrane
Type Confidence: 0.53
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVKWTLLG GVATFIVAIV LYKLIVLAGG YMMDEKQLVF HSSSRIVDQK GKEITKLYVE  60
   61 NRELVPIEQI PKYVQQAFVA VEDSRFYEHQ GIDYPSIFRA LYKDTLAGEK LEGGSTITQQ 120
  121 LAKDVFLTRE KTFTRKLKEV AISLQLEQKY TKQQILEMYM NHIYFGHGAY GIQAAAKLYF 180
  181 NKNVEDLTVE EGAMLAGLPK SPNGYSPYYS AEKSKERRDL VLSLMHKQGY LTAEESVRYQ 240
  241 GKIIALYKNL DENELAYMPY IDMVIDEAAR LYGLSHQEVL RGGYTFVVPM DEKIQKVAYN 300
  301 QFQDARNFPG KEEGAQGAFL LMDNRTGGIK AAIGGRKYVP RGFNRVFAKR QPGSVLKPLI 360
  361 VYAPALETKK YNPYSLLTNE RNSFEGYEPR NYNHEYSKEM TMYDAILESA NVPAVSLLNE 420
  421 LGVEEGKQYL EKGNVHIADA GLSTALGGLK NGVSTFDLVK MYRSFLANGN IIEPHVIDKV 480
  481 LNRHGAVIGE SPKVETKIFS KQTAWYMTKM LEGVVKEGTA RAGVYNGALA GKTGTTSLPN 540
  541 DDKGARDMWF VGYTPNLVGA VWIGYDRTDK EHQLQGESAS ATKLFKKILT KANVEHKEKF 600
  601 MKPEGVETIG APIRLRRIED VKMKLSFSPF GLFKAKLSWT PLPDNRIMYR IYRVENGIHT 660
  661 HVSTVNGAGE YEEKFVNIFS KPSFYVVPYN TQTNREGEKS KVAKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle