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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74494194, gi|...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPLNQASAE VINRERYQLD WAYSPQYGKD VRTELLKNAS GQIAYCLVYG LKSPNGEDLP  60
   61 EAGKTDDVSY RVLMNGYPQK TPENLGVFNW KEAHYATQLA LWNALGQISV DELQFKNAAV 120
  121 EKAAKNIIHA ANQSQDTQDV WMNVIPTDKQ EAQLNGEYFE TTTYNVQTNA KKGTFHVEMN 180
  181 NAPQGTRIVT EQGEVKETFQ LGEKFRIQVP KSSKSSELSL KVVSNLTNVH AIVYKGTSTI 240
  241 QDATVLLERS TEQISTDLQV FWKANGALKV MKVDENQKPL PGAVFEITNS NQQVTGTITA 300
  301 DKNGIAEMGN LELGTYTVKE VKAPIGYVLD ATPKPFEVKT GEVAVIEMKN VQIKGNIEIK 360
  361 KVSDTGKILP GVEFTVFKPE GKAVTKVTTN QEGIAKVNSL PFGKYYFQET KGLEGYLLNQ 420
  421 TKYPFEVKEH NQTLTFEVKN DQVKGNVQLV KVDEDGKTKL EGAVFILADE KGKKISEHKT 480
  481 DKNGLIKIDN IPFGKYQFIE KTSPAGYVLV KEPIPFSITE NGKTIELVAK NTKIRGSIEI 540
  541 TKVDVADGNN KLPGAEFTIY NEQGQEVVKG KTNEQGIAKF NKLPAGKYTY KETLSPQGYV 600
  601 SHEETFSFEI KTDGEIIKHI VKNKKIEGSL EITKVDVADG NNKLPGAEFT IYNEQGQEVV 660
  661 KGKTNEQGIA KFEKLPAGKY TYKETFAPEG YLINEETFSF EIKTDGEIIK HVVADQKKEV 720
  721 PPTPETPQPE KPEQPKPQPE QPQPEKPQTP QVIEKPVPTP EKPQNIVKQP QPMKKQPKKV 780
  781 ESHLPTTGGK AENPYWKWIG VTFVVLGSIL AVYALRKRKN QEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle