YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75514725
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSARIMKRLA LTTALCTAFI SAAHADDLNI KTMIPGVPQI DAESYILIDY NSGKVLAEQN  60
   61 ADVRRDPASL TKMMTSYVIG QAMKAGKFKE TDLVTIGNDA WATGNPVFKG SSLMFLKPGM 120
  121 QVPVSQLIRG INLQSGNDAC VAMADFAAGS QDAFVGLMNS YVNALGLKNT HFQTVHGLDA 180
  181 DGQYSSARDM ALIGQALIRD VPNEYSIYKE KEFTFNGIRQ LNRNGLLWDN SLNVDGIKTG 240
  241 HTDKAGYNLV ASATEGQMRL ISAVMGGRTF KGREAESKKL LTWGFRFFET VNPLKVGKEF 300
  301 ASEPVWFGDS DRASLGVDKD VYLTIPRGRM KDLKASYVLN SSELHAPLQK NQVVGTINFQ 360
  361 LDGKTIEQRP LVVLQEIPEG NFFGKIIDYI KLMFHHWFG

Type	Start	End	Confidence
Signal Peptide	1	25	0.93
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	399	0.99