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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85821005, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNFLNFLYS TRLMAILFIL FAVAMGVATF IENDYGTQTS KALVYNAWWF EVIMVLFVIN  60
   61 FFGNIFRYRL YKKEKWATLM FHIAFLFVII GAAVTRYIGY EGIMLIDEGE TTNTFLSETT 120
  121 YVNVIVDNNE VQKNVHEPIL LSAWGSNSWS YSDDFKGTDY SIDLVDYIPW AEQKLVDDEN 180
  181 GVEYLFLVES SSGNRHEHYI KSGTVSNIHN ILVGYNAKDD NASINIFKRN DSLKIKTKFD 240
  241 GNYKIMATLT DGVVKKDSVQ EFNLRSLYNV AELPFVVPEL PKKGIMKTLS GAKDDEKLDV 300
  301 IVVDVTTNDQ TKRVELTGGK FNVDNSQEFT LEGLNFRMWY GAKILNAPFS IKLNDFQLEK 360
  361 YPGSESAASY ASEVTVIDNE ESFDYRIFMN HILDHKGYKF FQSSYDLSGE REQTHLSVNH 420
  421 DWWGTFITYL GYSLLYTGMI CIFFAKHTRF DTLKKSLKKI RTKKTTMSLI TALFISSFAI 480
  481 AQDADHDHSD PNHVHEPAKT EVVTQKADPH KVNRITNAQI DSILQANKIS LEHAEEFNKL 540
  541 VIQDAGGRMK PAHTFASELV RKVSQAETLH GMQPSQVLLS IIENSRLWYE VPSVYLEEEN 600
  601 MKIREQLGLA DTTTYARLSD FFTNRGEYLI REQVAEAQKK NVQNKFEKDL IKIDRRVGLL 660
  661 YSAIGGGILK IYPIPGDENN KWISQPETLM EKGFKAADTI FVRKSLPLYV QLLQTAKKTN 720
  721 DYTKANQVLD GIKKFQKTYG AEVYPSEDKI ELEIAYNKYN IFKKLVRYYG FMSLLLIGFV 780
  781 VAQIFSSKKW INYVVKVLIG LTIGFFLLHT GGLIARWYIS GNAPWSNAYE SIIYVAWTTM 840
  841 LFGFYLGRKS ALTIAATTFI TSIILFTASM NWLDPEIANL QPVLNSWWLL VHVSIIVASY 900
  901 GPLTLGMILG IFSLFLILFT NKNNKKKMDL NIKEITIINE MAVTVGLVML TIGNFLGGMW 960
  961 ANESWGRYWG WDPKETWALI SIMVYAFVLH MRLIPGLRGR YTFNLWTIIA YASIMMTYFG1020
 1021 VNFYLSGLHS YASGDRVITP GSVYYSVGFV IILGTLSWFK YKKYYKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle