YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|189378104, gi...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYHLRVPQTE EELERYYQFR WEMLRKPLHQ PKGSERDAWD AMAHHQMVVD EQGNLVAVGR  60
   61 LYINADNEAS IRFMAVHPDV QDKGLGTLMA MTLESVARQE GVKRVTCSAR EDAVEFFAKL 120
  121 GFVNQGEITT PTTTPIRHFL MIKPVATLDD ILHRGDWCAQ LQQAWYEHIP LSEKMGVRIQ 180
  181 QYTGQKFITT MPETGNQNPH HTLFAGSLFS LATLTGWGLI WLMLRERHLG GTIILADAHI 240
  241 RYSKPISGKP HAVADLGALS GDLDRLARGR KARVQMQVEI FGDETPGAVF EGTYIVLPAK 300
  301 PFGPYEEGGN EEE

Type	Start	End	Confidence
Non-Cytoplasmic	1	200	0.91
Transmembrane Helix	201	224	0.85
Cytoplasmic	225	313	0.86