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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116620870, gi...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTWLNTVIA EFARHPWRYA LLVACVAAGI CVASLNKPST AMLLRVGYSD FFPYVARDEL  60
   61 GRPIGLAVEL VQEAAARSGV ELRWIAIDDA EQALRTGQID LYPILTATAE RKRDLYPSIP 120
  121 WWEVTNSLLS LRDHPLKNPA AAAGRRIAIR NRSTSDVLAA VVLPGAAVVR MPTGRVSIGA 180
  181 LCAGSVDGVL LDARLIYEAM LDRPEGCADR KFMVVPLPQT SLPLATFARS PYPRAVRRLY 240
  241 AAIEQATLDG TMTAIANRWF AIPQQRYVQQ RLAGRQRYLL GLLFAACVLL LTAFTWWHYR 300
  301 RTLRIRRTAE NAWTRAVEAE RRFETFMAHT PAISFIKDAA GRMIYVNHAF VRFHGFSAAQ 360
  361 SIGRLDTELF GESVAGIRER DAEVLQTGRP VQYLLPLPGT DGALYYWLVL KFLLRGEAGE 420
  421 TRIGVVAIDI SDQQRAAELI ARSEERYRML FEEAPVAIHE IDRDGLVTRI NRAGRMLCGY 480
  481 SESEIIGRHA SEFVAPHYRE ESRAAVHAKM KGTRPLAPFE RHYQRKDGRL LRVEVHETAI 540
  541 FDHGGEIQGL RSCLIDLTER YEAQERLDAF ALQLQQNNSA LALALESARQ ATRLKSQFLA 600
  601 NMSHEIRTPM NGVLGMTELL VQSGLTEEQR SLALSVTQSG EHLLAIINDI LDFSKIESGK 660
  661 LELEATPFDP TATIEAVIEL MAPTAHIKNL ELTYWIAAEM PARVRGDAAR LRQVLLNLLG 720
  721 NALKFTAEGE IAIQATFDAA ADRLRVSVAD TGIGIPEAAI PHLFAAFTQA DNSTTRRFGG 780
  781 TGLGLTIAKS IVELMDGEIG IESRYGHGST FWFTASLPAV AQAAAPPAPL PPAAILIVDD 840
  841 NASSRAILER HIALWGLRAE TAVDGAHALA LLRSHPFDAA LIDTQIPGTD VVALLHEIAA 900
  901 ESALRSTSII RLSSIGILPD LGVASSIHKP VKPEVLYECL SRILQPVATL ASAARVPAAS 960
  961 SPLHAARGRV LIAEDNAVNQ RVARLQVAHC GFDSDVVSNG QEALDALSHM NYALVLMDCQ1020
 1021 MPGMDGYAAT RELRRRENGA RHLPVIALTA NAFATDREAC LEAGMDDHLS KPVSLRSLAA1080
 1081 ILDRWSIAAR ES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle