YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83585882, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVSLTAILL SCSSAWAAGK GGIGLAATRL VYSEGEEQIS LGVRNTSPDV PYLIQSWVMT  60
   61 PDNKKSADFI ITPPLFVLNP ANENLLRIMY IGAPLAKDRE TLFFTSVRAV PSTTKRKEGN 120
  121 TLKIATQSVI KLFWRPKGLA YPLGEAPAKL RCTSSADMVT VSNPTPYFIT LTDLKIGGKV 180
  181 VKNQMISPFD KYQFSLPKGA KNSSVTYRTI NDYGAETPQL NCKS

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	224	0.99