YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|251784702, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIIAWIIFG LIAGIIAKLI MPGRDGGGFF LTCILGIVGA VVGGWLATMF GIGGSISGFN  60
   61 LHSFLVAVVG AILVLGIFRL LRRE

Type	Start	End	Confidence
Non-Cytoplasmic	1	3	0.86
Transmembrane Helix	4	21	0.86
Cytoplasmic	22	28	0.80
Transmembrane Helix	29	49	0.95
Non-Cytoplasmic	50	60	0.69
Transmembrane Helix	61	81	0.93
Cytoplasmic	82	84	0.91