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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85819353, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGILFIAYFV AMAVGTFLDQ GQETSPTPYS RYWIYDAWWF TLIHILFVVN FIGNIFRYKL  60
   61 LRKEKITTLI FHLSFVLILI GAGITRYVSY EGVMPIEEGA SENSFLSEKT YLEVFIDGEQ 120
  121 NGQPMRRAVE KELSLSPRLN NDFTWTEDFV HDTNNRSDKT TFTFDFNKFI DGAQDGFVED 180
  181 ENGLWHLKIV ETGTDNQRHE HFLVEGELVN IHNVLYAFNK PTDGAINIGF DGENYTFKSP 240
  241 FAGSVTVMAT QDESEVPEDV EQPLKLRALY NLGGKLLVIP DQAIRGRTGI VAKEVKEKNQ 300
  301 EDALFVDVTV NGETKTVGLL GGRGYSNDKK QIEVGGHKIY LAYGSKAMPL PFSIKLNEFI 360
  361 ARRYPGTQNV YSSFESKITV EDTEESFDYD IYMNHVLDHK GFRFFQASFF PDESGTILSV 420
  421 SHDFWGTWVT YIGYFLLYIG MMMILFDKGS RFGELKRRLD KVKLKKSKLM MIVFLIAFAK 480
  481 AGYAQEDISN QTTEVSNGNV VVQDSVSVTG ENIGDILGLE SHTGPQHEQR MPSQEEIKKL 540
  541 IVENAIPLEH AEKFGRLIIQ EDGRMMPINT YSSMLLRKLS RSDTYEGLTA DQVMLSMMEN 600
  601 PQIWSFAEII YLPKGNDSLR NVIGVPSDRK YFKQMDFFTS DFKYKLSPFL PDAYAEANPT 660
  661 KISKEFIDVS ERMNLLDRTL VKEVLRIFPK PDDSNNTWIS PIQVKDVPYK ATDSVIANQI 720
  721 FPAYLLSLKK GRLSGDYSDA DKVLQGIEKF QRSHSNDIMP SVEKRDAEIF YNKYDVFTKL 780
  781 YWMYMLAAVF MMVFVIVAIF KPNKFVSIMT KLGAAAIVVL FIVHTIGLIW RWYIAGHAPW 840
  841 SNAYESVLYV GWATVFFGLA FGRKSQLTIA STAFVGAFIL WAASMNWMNP EIENLQAVLD 900
  901 SYWLMIHTAV IVASYGPFTL GAILGIVSLL LMIFTTDKNR EKMDLNIKEI TIINELALTV 960
  961 GMVLLAIGTF LGGQWANESW GRYWGWDPKE TWALISLIVY AFVIHMRLIP GLRSKWLFNF1020
 1021 VSIISLGSIL FTYFGVNYYL SGLHSYQSGG EIADQKILIT AAVLTVFGAI SYIQYRKHYV1080
 1081 KKKSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle