YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82394532
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLRAFFVYF TVLISSFQVL SAPPSSFSKA KKEALKIYSD HPTSFYCGCD ITWQGKKGIP  60
   61 DLKSCGYAVR KQQKRASRIE WEHVVPAWQF GHQRQCWQSG GRKNCTKNDT VFRSMEADLH 120
  121 NLTPAIGEVN GDRSNYNFSQ WNGMDGVTYG QCEMQVNFKQ RRVMPPDRAR GSIARTYLYM 180
  181 SQEYGFKLSK QQSQLMTAWN KLYPVDTWEC ERERRIFKIQ CNHNPFVFKA CQAL

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	234	0.98