YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82394528
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLIRLVISI IAITFSFSAL SAPPSSFSKA KKLAVKIYLD HPTSFYCGCD ITWKDKKKGI  60
   61 PDLESCGYEV RKQEKRASRI EWEHVVPAWQ FGHQRQCWQD GGRKNCTKND KNFKMMEADL 120
  121 HNLVPAIGEV NGDRSNFRFS QWNGSKGANY GQCAFKVDFK GRVAEPPAQS RGAIARTYMY 180
  181 MNKEYRFNLS KAQRQLMEAW DKQYPVSAWE CERDQRIAKI QGNHNQFVFK ACTK

Type	Start	End	Confidence
Signal Peptide	1	28	0.92
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	234	0.99