YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75239602
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRYALITAL AMFLAGCVGQ REPAPVEEVK PAPEQPAEPQ QPVPTVPSVP TIPQQPGPIE  60
   61 HEDQTAPPAP HIRHYDWNGA MQPMVSKMLG ADGVTAGSVL LVDSVNNRTN GSLNAAEATE 120
  121 TLRNALANNG KFTLVSAQQL SMAKQQLGLS PQDSLGTRSK AIGIARNVGA HYVLYSSASG 180
  181 NVNAPTLQMQ LMLVQTGEII WSGKGAVSQQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	210	0.99