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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75511242
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGMGLVCSA LPAFAIEAWN NQQGGNKYQV IFDGKIYENA WWVSSTNCPG KAKANDATNP  60
   61 WRLKRTATAA EISQFGNTLS CEKSGSSSSS NSNTPASNTP ANSGSATPAQ GTVPSNSSVV 120
  121 AWNKQQGGQT WYVVFNGAVY KNAWWVASSN CPGDAKGNDA SNPWRYVRAA TATEISETSN 180
  181 PQSCTSAPQP APDVKPAPDV KPAPDVQPAP ADKSNDNYAV VAWKGQEGSS TWYVIYNGGI 240
  241 YKNAWWVGAA NCPGDAKEND ARNPWRYVRA ATATEISQYG NPGSCSVKPD NNGGAVTPVD 300
  301 PTPETPVTPT PDNSEPSTPA DSVNDYSLQA WSGQEGSEIY HVIFNGNVYK NAWWVGSKDC 360
  361 PRGTSAENSN NPWRLERTAT AAELSQYGNP TTCEIDNGGV IVADGFQASK AYSADSIVDY 420
  421 NDAHYKTSVD QDAWGFVPGG DNPWKKYEPA KAWSASTVYV KGDRVVVDGQ AYEALFWTQS 480
  481 DNPALVANQN ATGSNSRPWK PLGKAQSYSN EELNNAPQFN PETLYASDTL IRFNGVNYIS 540
  541 QSKVQKVSPS DSNPWRVFVD WTGTKERVGT PKKAWPKHVY APYVDFTLNT IPDLAALAKN 600
  601 HNVNHFTLAF VVSKDANTCL PTWGTAYGMQ NYAQYSKIKA LREAGGDVML SIGGANNAPL 660
  661 AASCKNVDDL MQHYYDIVDN LNLKVLDFDI EGTWVADQAS IERRNLAVKK VQDKWKSEGK 720
  721 DIAIWYTLPI LPTGLTPEGM NVLSDAKAKG VELAGVNVMT MDYGNAICQS ANTEGQNIHG 780
  781 KCATSAIASL HAQLKGLYGN KSDAEIDAMM GTTPMVGVND VQGEVFYLSD ARLVMQDAQK 840
  841 RNLGMVGIWS IARDLPGGTN LSPEFHGLTK EQAPKYAFSE IFAPFTKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle