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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77455398
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYVLIATCVI PIFGAALSKT VLYQAPDECR WSGGGEHDIT LVCHLRTINS ELENTNFSVI  60
   61 QPQNTVRLRL ECNDALFFQS SLSPDSFRSL VELRDLTIEY CKLGNLTDGS FRGLQELRNL 120
  121 TIRTHNGDWS TMSLEMASNS FVEFRQLERL DLSLNNIWLI PDGMVCPLKS LQHLNASYNK 180
  181 IQDISNFYFS ASLSSRKARV CGSTLQSLDL SANKMVSLPT AMLSALGRLT HLNMAKNSMS 240
  241 FLADRAFEGL LSLRVVDLSA NRLTSLPPEL FAETKQLQEI YLRNNSINVL APGIFGELAE 300
  301 LLVLDLASNE LNSQWINAAT FVGLKRLMML DLSANKISRL EAHIFRPLAS LQILKLEDNY 360
  361 IDQLPGGIFA DLTNLHTLIL SRNRISVIEQ RTLQGLKNLL VLSLDFNRIS RMDQRSLVNC 420
  421 SQLQDLHLND NKLQAVPEAL AHVPLLKTLD VGENMISQIE NTSITQLESL YGLRMTENSL 480
  481 THIRRGVFDR MSSLQILNLS QNKLKSIEAG SLQRNSQLQA IRLDGNQLKS IAGLFTELPN 540
  541 LVWLNISGNR LEKFDYSHIP IGLQWLDVRA NRITQLGNYF EIESELSLST FDASYNLLTE 600
  601 ITASSIPNSV EVLYLNDNQI SKIQPYTFFK KPNLTRVDLV RNRLTTLEPN ALRLSPIAED 660
  661 REIPEFYIGH NAYECDCNLD WLQKVNRESR TQPQLMDLDQ IHCRLAYARG SSHVSLIEAK 720
  721 SDDFLCKYAS HCFALCHCCD FQACDCKMEC PDRCSCYHDQ SWTSNVVDCS RASYEQTLPS 780
  781 HIPMDSTQLY LDGNNFRELQ SHAFIGRKRL KVLHLNHSRI EVLHNRTFYG LLELEVLQLQ 840
  841 SNQLKALNGN EFQGLDNLQE LYLQHNAIAT IDTLTFTHLY HLKILRLDHN AITSFAVWNF 900
  901 LPSYLNELRL ASNPWTCSCE FIDKLRDYIN RHEYVVDKLK MKCDVISGNS TQQMVIYPGS 960
  961 GEPASLPVVQ CSQTLPLGLD NNFNYAEQAG GENASNATST KMILNQPPKL DYIPILVAIL1020
 1021 TAFIFVMICI SLVFIFRQEM RVWCHSRFGV RLFYNAQKDV DKNEREKLFD AFVSYSSKDE1080
 1081 LFVNEELAPM LEMGEHRYKL CLHQRDFPVG GYLPETIVQA IDSSRRTIMV VSENFIKSEW1140
 1141 CRFEFKSAHQ SVLRDRRRRL IVIVLGEVPQ KELDPDLRLY LKTNTYLQWG DKLFWQKLRF1200
 1201 ALPDVSSSQR SNVAGQSCHV PINHASYHHH HHVHQQAMPL PHSVHHHQQQ FMLPPPPQQP1260
 1261 GSFRRQPSLH QQQQQQQSNS RQQQHDAAAA ATAGGLADGR RVGGWACSTD DSPGGWHPAA1320
 1321 EPTIATEPAT DAG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle