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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77455254
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.23
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVLTLLPGMI LGTRYNQLHL YANGGASSSG PGGYRPAPSS QNEVYSIADS QPMTEDGYMP  60
   61 PSQHFPPTHS DLDPPAQQQS TCQTVCACKW KGGKQTVECI DRHLIQIPEH IDPNTQVLDM 120
  121 SGNKLQTLSN EQFIRANLLN LQKLYLRNCK IGEIERETFK GLTNLVELDL SHNLLVTVPS 180
  181 LALGHIPSLR ELTLASNHIH KIESQAFGNT PSLHKLDLSH CDIQTISAQA FGGLQGLTLL 240
  241 RLNGNKLSEL LPKTIETLSR LHGIELHDNP WLCDCRLRDT KLWLMKRNIP YPVAPVCSGG 300
  301 PERIIDRSFA DLHVDEFACR PEMLPISHYV EAAMGENASI TCRARAVPAA NINWYWNGRL 360
  361 LANNSAFTAY QRIHMLEQVE GGFEKRSKLV LTNAQETDSS EFYCVAENRA GMAEANFTLH 420
  421 VSMRAAGMAS LGSGQIVGLS AALVALIVFA LGVIMCLLLR VKRQPYVDSK TPNHMEVITS 480
  481 VNHQNSITNK TQPATGNGSI GGVVIANGAV ANIIDGGVVQ GGTLERKSSG RGGVPHGVHD 540
  541 QRSANPVQKP PRLTDLPYST QGYDNNGSVL STASCFISPS GSTGNGGNNP DLINDTKRFG 600
  601 SDEFADLKIP PISGVGVGGS GEYSRANGCD SLYPSGLWEH GAPVGTTSAD DLFMKRYTDK 660
  661 TPIIDSTQLY DLHERTAATD YFSKTFPRSH LQQGMMTGGG GGTSTASTVT TNLSGGSSSG 720
  721 YPNDYGLPLV PGAEHQHNHQ LQMHPLQQLQ QQLTSTLNHQ KQEGSSTGSS PHFSSRTLPR 780
  781 LHEGSGGGGS SRSSPTPAVS GGHANQAANP STSSSSCSIL PNGQPINAKT IRVWQKGGVP 840
  841 VLPPVTALKR ALISSSRNSP DEGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle