YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Y1002_ACTSZ
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFRLAAVAA AALLASSASF AGMVTGSSNI DFLAVDGQKA NRSLLKETRS FNINDTHTHQ  60
   61 VVVRVSELIR EGSDRTLFES DPIVVTFQGS TEDIRISAPR LTNEREANNF KANPKITVKT 120
  121 VSGAEIASKQ DYLKQEGFLP GVNLEENLSN YNQSGATASV AGFATASMPA TVGTVQNGKV 180
  181 KKGKVTVQGE NAAEQMLQYW YQQADKETQE RFLNWVKTQK

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	220	0.99