YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GLMU_ACTSZ
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLSVVILA AGKGTRMYSD LPKVLHKVAG KPMVKHVIDT AKQLSAEQIH LIYGHGADLL  60
   61 KERLADEPVN WVFQAEQLGT GHAMQQAAPF FKDDENIVML YGDAPLITKE TLERLVAAKP 120
  121 ENGIALLTVE LENPTGYGRI IRENGSVVAI VEQKDATPEQ LKITEVNTGV MVSDGASFKK 180
  181 WLARLDNDNA QGEYYMTDVI GLANQDGFKV AAVTADDMME VEGANNRLQL AALERYFQRK 240
  241 QATALLLAGV SLADPERFDL RGELEHGKDV EIDVNVIIEG KVKLGNGVKI GAGCVLKNAI 300
  301 IGDNTEIKPY SVLEDSSVGE QAAIGPFSRL RPGAELAAET HVGNFVEIKK AVVGKGTKVN 360
  361 HLTYVGDAEI GSGCNIGAGV ITCNYDGANK FKTLIGDNVF VGSDVQLVAP VKVNNGATIG 420
  421 AGSTITKDVA AGELVTTRVP QRHTADWERP SKKK

Type	Start	End	Confidence
Signal Peptide	1	14	0.53
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	454	0.99