YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75429187, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.56
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKRLFDIVI ASVALILFSP LYLLVAYKVR RNLGSPVLFK QIRPGLHGKP FEMIKFRTMK  60
   61 DGVDQNGNIL PDAERLTPFG KMLRATSLDE LPELWNVLKG DMSLVGPRPL LMDYLALYNE 120
  121 RQAKRHDVKP GITGYAQVNG RNAISWEQKF ELDAWYVEHQ SFWLDLKIIA KTIQKVIAKD 180
  181 DINAADDATM PKFEGNKKS

Type	Start	End	Confidence
Cytoplasmic	1	7	0.37
Transmembrane Helix	8	27	0.53
Non-Cytoplasmic	28	199	0.87