YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74277650, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLFCTRKA KEVAVRRKLI LTDKEFMKKK SGLSFLWLSA VAFVIDLLTK YLVTQNFELY  60
   61 ESVNILPVFN LTYARNTGAA FSFLAEHGGW QKYFFIALAL IISAVLVYLL RKNSARQKLQ 120
  121 NSAYALIIGG ALANMADRAY HGFVVDFFDF YWREWHYPVF NVADIAICVG VGLLILDSFK 180
  181 NGEKKANEQ

Type	Start	End	Confidence
Cytoplasmic	1	32	0.96
Transmembrane Helix	33	53	0.90
Non-Cytoplasmic	54	89	0.97
Transmembrane Helix	90	110	0.93
Cytoplasmic	111	121	0.85
Transmembrane Helix	122	141	0.91
Non-Cytoplasmic	142	156	0.90
Transmembrane Helix	157	176	0.92
Cytoplasmic	177	189	0.86