YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67923617, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFNLNSVEI SIIVPCYNEE QGLEILFERL LRILDRLSLS YEVICVDDGS RDQTLEYLID  60
   61 YHNRYPEIKV ISLSRNFGKD IALTAGLENA QGKAIIPIDA DLQDPPELIE QLVAKWREGY 120
  121 DVVSGKRRSR QGESWVKKTT ANAFYRIISR ISSVPIPRDT GDFRLLDRRV VEAIKTMPER 180
  181 TRFMKGLFAW VGFKQTYVLY DRPNRIQGTT KWNYWKLWNF ALDGITSFSL VPLKVWSYLG 240
  241 VVLSLLAFTY GSFLIIRTII LGIDVPGYAS LMVTILFIGG VQLITLGILG EYLGRIYEET 300
  301 KQRPLYLIRE RYGFEDKLGY KQLENSN

Type	Start	End	Confidence
Cytoplasmic	1	234	0.80
Transmembrane Helix	235	260	0.84
Non-Cytoplasmic	261	267	0.59
Transmembrane Helix	268	293	0.82
Cytoplasmic	294	327	0.70