YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75259549
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRFAGACRF VFNRALALQN ENHEAGNKYI PYGKMASWLV EWKNATETQW LKDSPSQPLQ  60
   61 QSLKGLERAY KNFFQKRAAF PRFKKRGQND AFRYPQGVKL DQENSRIFLP KLGWMRYRNS 120
  121 RHVTGVVKNV TVSQSCGKWY ISIQTESEVS TPVHPSASMV GLDAGVAKLA TLSDGTVFEP 180
  181 VNSFQKNQKT PARLQRQLSR KVKFSNNWQK QKRKIQRLHS CIANIRRDYL HKVTTTVSKN 240
  241 HAMIVIEDLK VSNMSKSAAG TVSQPGRNVR AKSGLNRSIL DQGWYEMRRQ LEYKQLWSGG 300
  301 QVLAVPPAYT SQRCACCGHT AKENRLSQSK FRCQVCGYTA NADVNGARNI LAAGHAVLAC 360
  361 GGMVQSGRPL KQEPTEMIQA TA

Type	Start	End	Confidence
Signal Peptide	1	17	0.69
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	382	0.99