YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|193069081, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKFIFVLLT LLLVSPFSFA MKGIIWQPQN RDSQVTDTQW QGLMSQLRLQ GFDTLVLQWT  60
   61 RYGDAFTQPE QRALLFKRAA AAQQAGLKLI VGLNADPEFF MHQKQSSAAL ESYLNRLLAA 120
  121 DLQQARLWSA APGVTPDGWY ISAEIDDLNW RSEAARQPLL TWLNNAQRLI SDVSAKPVYI 180
  181 SSFFAGNMSP DGYRQLLEQV KATGVNVWVQ DGSGVDKLTA EQRERYLQAS ADCQSPAPAS 240
  241 GIVYELFVAG KGKTFTAKPK PDAEIASLLA KRSSCGKDTL YFSLRYLPVA HGILEY

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	296	0.99