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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|193063346, gi...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNCWKILEI EETTDVDIIR RAYLALLPSF HPETDPQGFK QLRQAYEEAL RIAQSPAKSV  60
   61 WQPEEYEVAE HEILLAFRAL LASDSERFLP SAWQRFIQQL NYCSMEEIDE LRWSLCTIAM 120
  121 NTAHLSFECV VLLAERLRWL QEENVGEIDE EELESFLYAI AKGNVFNFQT ILHLPVAVQN 180
  181 DTIDFYQMFA RIWSSHPEWL TLYLAQHRAV IIPDDAKLHR NLLRWYSAGR LGIPELLDYA 240
  241 RSWREAESDN EDARYYEYAQ RVYCGEGESL LAELCDYWRE YPSTQADALI LQWCRQHRVD 300
  301 YYPLVVMMIE ARELVNDQGK PLLYIPGDSA RTRFHLYEIL SDEKLSALGR SLVEMVLHKG 360
  361 RKPRISLTRD TEHPLWPLYL VAKQLVQANQ PTEESLMPIV SRLDAEDRCP LEALIIRRLL 420
  421 IQAANFTEKQ TVEPEPQPQP MPVDDGGPGC LGIIKIIFYI FIFAGLIGKI LHLFG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle