YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190903991, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLWQSDLRV SWRAQWLSLL IHGLVAAVIL LMPWPLSYTP LWMVLLSLVV FDCVRSQRRI  60
   61 NARQGEIRLL MDGRLRWQGQ EWCIVKAPWM IKSGMMLRLR SDGGKRQHLW LAADSMDEAE 120
  121 WRDLRRILLQ QETQR

Type	Start	End	Confidence
Cytoplasmic	1	11	0.94
Transmembrane Helix	12	32	0.88
Non-Cytoplasmic	33	37	0.64
Transmembrane Helix	38	55	0.78
Cytoplasmic	56	135	0.84