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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|192930667, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHIRKHRLAG FFVRLFVACA FAAQAPLSSA ELYFNPRFLA DDPQAVADLS RFENGQELPP  60
   61 GTYRVDIYLN NGYMATRDVT FNTGDSEQGI VPCLTRAQLA SMGLNTASVS GMNLLADDAC 120
  121 VPLTTMIQDA TAHLDVGQQR LNLTIPQAFM SNRARGYIPP ELWDPGINAG LLNYNFSGNS 180
  181 VQNRIGGNSH YAYLNLQSGL NIGAWRLRDN TTWSYNSSDR SSGSKNKWQH INTWLERDII 240
  241 PLRSRLTLGD GYTQGDIFDG INFRGAQLAS DDNMLPDSQR GFAPVIHGIA RGTAQVTIKQ 300
  301 NGYDIYNSTV PPGPFTINDI YAAGNSGDLQ VTIKEADGST QIFTVPYSSV PLLQREGHTR 360
  361 YSITAGEYRS GNAQQEKPRF FQSTLLHGLP AGWTIYGGTQ LADRYRAFNF GIGKNMGALG 420
  421 ALSVDMTQAN STLPDDSQHD GQSVRFLYNK SLNESGTNIQ LVGYRYSTSG YFNFADTTYS 480
  481 RMNGYNIETQ DGVIQVKPKF TDYYNLAYNK RGKLQLTVTQ QLGRTSTLYL SGSHQTYWGT 540
  541 SNVDEQFQAG LNTAFEDINW TLSYSLTKNA WQKGRDQMLA LNVNIPFSHW LRSDSKSQWR 600
  601 HASASYSMSH DLNGRMTNLA GVYGTLLEDN NLSYSVQTGY AGGGDGNSGS TGYATLNYRG 660
  661 GYGNANIGYS HSDDIKQLYY GVSGGVLAHA NGVTLGQPLN DTVVLVKAPG AKDAKVENQT 720
  721 GVRTDWRGYA VLPYATEYRE NRVALDTNTL ADNVDLDNAV ANVVPTRGAI VRAEFKARVG 780
  781 IKLLMTLTHN NKPLPFGAMV TSESSQSSGI VADNGQVYLS GMPLAGKVQV KWGEEENAHC 840
  841 VANYQLPPES QQQLLTQLSA ECR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle