YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67783074, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLRQIISGI AVLSVTASCA PTPQVEKKSE PAETLNVEVP KPRAGEPVSP ISAATVSNAE  60
   61 MVELGKKLFF DPRLSKSGFI SCNSCHNLSM GGSDNLKSSI GHKWNKGPIN SPTVLNSSMN 120
  121 LAQFWDGRAK DLKEQAGGPI ANPGEMAFTH ELAVGVLQSI PGYVDEFKKV FGSDQITIDQ 180
  181 ITQAIAAFEE TLVTPGSRFD KWLLGDDNAI TKDEREGYEL FKSSGCTACH NGPALGGNSY 240
  241 QKMGVVEPYK AASKVEGRSA VTGKDADRFN FKVPALRNVA LTYPYFHDGE AATLAKAIDV 300
  301 MGQIQLGKRF TPEENAKIVA FMKTLTGKQP VFELPVLPPS SDTTPAPEPF GK

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	352	0.99