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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|189347431, gi...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLMKKNVSG GIIAVILLLS ILLLSGWAIY VADRQLRAGL LAEMMMMRQE IGHVELQALT  60
   61 GTAADLDKSG YQELKGLLSS VCRVRTKCRF VYLIGMKPEG TLFFYADSEP EGSPDISPAG 120
  121 QIYQEASGRL RNVFTSGKAD VEGPLPDRWG IWVSGFLPVI DNRSGKIVAV LGMDIEAADW 180
  181 AWDIASRSAL PIGGIVVISI VVASFLFSSL RSDDTLSSPV LEKLFPFLVI VFIVLATGFA 240
  241 SLLFWMQDRR LEDVIRQTEA EVLMQFRTSL FVQSDGLEIA LNVIESDSLI ADALLERQRE 300
  301 TLYRKYLPLF DHLQKDHGVS YFCFSDSSRR CLLRMHDIEK RNELNSRFTI LQAQKTRKIA 360
  361 TGIELDPDGM LTLRVVMPVI HDGVIAGYVD IAKEIKDVAD HIHFTQGLAM AFFLDKPLLK 420
  421 RTAWESAMQK LGRESDWNRF ADNVLVFTTL PRFPEAFDSC LSQSRGRSFL QTADVEWNGK 480
  481 SWRVAALPFE DVSGRLIGRI LVLQDVSAFK AVLFRIISFS GGSLVVILAL FFGLLYNLLK 540
  541 RIDRGVINRE RELIESRERY MLAVNGSNDG IWDWNLKSNA LFLSPKWKMM IGYYDDTVSP 600
  601 DTYDAFEDRL HPDDKEPYRR HLQQYLKGEL PVFSTEFRFL HRNGSYMWIL GKGEALRDKQ 660
  661 GMPYRMAGSF SDITSRKKAG EELMHRSAFQ LVLMELAIGF VNKPLEELDS SINRALALVG 720
  721 AFLNVDRTYL FRYDFEKETM SNTHEWCSEG ISAEKDNLQN IPNSSLPDWV FTHLKGRIIH 780
  781 IPNVQELPED SSLKSILELQ GIQSLISLPL VYGEQCFGFA GFDAVREKKN WGDEEISLLR 840
  841 VLTELFTNAE LRYRHETALL DARLAAEAAN RAKSEFLANM SHEIRTPMNG VIGMTRLLLN 900
  901 TSLAEEQRSF AQTALASGES LLTVINDILD FSKIEAGKLE LEEISFDLRL LLDDFAAIMA 960
  961 VKAGDKGLEF ICAALPDVPV RFIGDPDRIR QILTNLAGNA VKFTHKGEVA VYVSLLRETD1020
 1021 EEVLVRFSVK DTGIGIPREK LDRLFRSFTQ VDASMTRKYG GTGLGLAISR QLVELMSGEI1080
 1081 GVNSQSGIGS EFWFTLSLKK NIFPSENGQY PLDSITGTRL LVVDDNAENR NMLRMLLTSW1140
 1141 GVRVSEVSCA STAIERLRQA AEEGDPFRIA IIDMEMPEID GLMLGRSIKD ETALADTALL1200
 1201 MMNSIGRRPD NEKLRRSGFF SFLVKPVRQS ELYNTVSEVL FSRDIDPCNA ESLQEKLAAG1260
 1261 SVTLSEAVDS EKNDSPVRIL LAEDSAVNQL VVTGILSKLG YVVDPVFNGQ EALARLREFA1320
 1321 YDLVIMDIQM PEMDGLEATR IIRDQASAVL RHDVPVIALT AHAMHGDREI CLQSGMNDYV1380
 1381 SKPIDPPALI GVIKKWL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle