YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157158455, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTTISPHD AQELIARGAK LIDIRDADEY LREHIPEADL APLSVLEQSG LPPKLRREQI  60
   61 IFHCQAGKRT SNNADKLAAI AAPAEIFLLE DGIDGWKRAG LPVAVNKSQP LPLMRQVQIA 120
  121 AGGLILIGVV LGYTVNSGFF LLSGFVGAGL LFAGISGFCG MARLLDKMPW NQRT

Type	Start	End	Confidence
Cytoplasmic	1	116	0.98
Transmembrane Helix	117	135	0.94
Non-Cytoplasmic	136	140	0.72
Transmembrane Helix	141	165	0.86
Cytoplasmic	166	174	0.97