YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75190178
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLFTDVTG TVPDAEEIAR KAELFRQQTG IAPFIVILPD INNEASLRQN GKAMLAHASS  60
   61 SLSNVKGSVL LLFTTREPRL IMITNGQVES GLDDKHLGLL IENHTLAYLN ADLWYQGINN 120
  121 ALAVLQAQIL KQPTPPLTYY PHPGQQHENA PPGSTNTLGF IAWAATFILF SWIFCYTTRF 180
  181 IYALKFAVAM TIANMGYQAL CLYIDNSFAI TRISPLWAGL IGVCTFIAAL LLTSKR

Type	Start	End	Confidence
Non-Cytoplasmic	1	154	0.66
Transmembrane Helix	155	176	0.86
Cytoplasmic	177	181	0.64
Transmembrane Helix	182	204	0.78
Non-Cytoplasmic	205	212	0.69
Transmembrane Helix	213	233	0.93
Cytoplasmic	234	236	0.74