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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75255350
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGAIGLNA IIFSPLLIAA DTGSQYGTNI TINDGDRITG DTADPSGNLY GVMTPAGNTP  60
   61 GNINLGNDVT VNVNDASGYA KGIIIQGKNS SLTANRLTVD VVGQTSAIGI NLIGDYTHAD 120
  121 LGTGSTIKSN DDGIIIGHSS TLTATQFTIE NSNGIGLTIN DYGTSVDLGS GSKITTDGST 180
  181 GVYIGGLNGN NANGAARFTA TDLTIDVQGY SAMGINVQKN SVVDLGTNST IKTNGDNAHG 240
  241 LWSFGQVSAN ALTVDVTGAA ANGVEVRGGT TTIGADSHIS SAQGGGLVTS GSDATINFSG 300
  301 TAAQRNSIFS GGSYGASAQT ATAVVNMQNT DITVDRNGSL ALGLWALSGG RITGDSLAIT 360
  361 GAAGARGIYA MTNSQIDLTS DLVIDMSTPD QMAIATQHDD GYAASRINAS GRMLINGSVL 420
  421 SKGGLINLDM HPGSVWTGSS LSDNVNGGKL DVAMNNSVWN VTSNSNLDTL ALSHSTVDFA 480
  481 SHGSTAGTFA TLNVENLSGN STFIMRADVV GEGNGVNNKG DLLNISGSSA GNHVLAIRNQ 540
  541 GSEATTGNEV LTVVKTTDGA ASFSASSQVE LGGYLYDVRK NGTNWELYAS GTVPEPTPNP 600
  601 EPTPAPAQPP IVNPDPTPEP APTPKPTTTA DAGGNYLNVG YLLNYVENRT LMQRMGDLRN 660
  661 QSKDGNIWLR SYGGSLDSFA SGKLSGFDMG YSGIQFGGDK RLSDVMPLYV GLYIGSTHAS 720
  721 PDYSGGDGTA RSDYMGMYAS YMAQNGFYSD LVIKASRQKN SFHVLDSQNN GVNANGTANG 780
  781 MSISLEAGQR FNLSPTGYGF YIEPQTQLTY SHQNEMAMKA SNGLNIHLNH YESLLGRASM 840
  841 ILGYDITAGN SQLNVYVKTG AIREFSGDTE YL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle